FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7824213
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGTTT763423697.57193471087763No Hit
GCACGTTA732280.9359152160095845No Hit
GCACGGTT163490.20895392290572867No Hit
GCACGTAT116010.14827050337203243No Hit
GCACGATT115060.14705632374783253No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)