FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3453421
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA142540.41275013964413837No Hit
CATTCAACTAGGCATG123510.3576453609334049No Hit
GTCGACCGATGCTCAA116120.33624629027274694No Hit
GGGGGGGGGGGGGGGG107450.31114074999833496No Hit
ACTGGGCACTTCTCGC102340.2963438283371764No Hit
TGTAAGCTGTTGTGAC96110.278303745763983No Hit
NNNNNNNNNNNNNNNN76820.22244609041295574No Hit
GCTTTAGGAACTAGTC73460.21271660767685144No Hit
TAGTTGCGACATAGCT58340.16893393536438217No Hit
CATCAGTGATTCGCAA53350.154484495229513No Hit
CAGGAGCCTCGTGCAC47120.13644441265631962No Hit
CAGGAGCCTTCCAATG41650.12060504641629273No Hit
TCCTTAAACAGGGAGG38670.11197592184677164No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)