FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004949919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15896063
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT486990.30635887640857995No Hit
AACTTACCTGAATCTC463840.291795521947793No Hit
GGGGGGGGGGGGGGGG409490.2576046660106971No Hit
GCTGGACACGCCCTGA204150.12842802648680998No Hit
ATTACCTACCGAGGAT181510.1141855061847704No Hit
CATAGTCGACTACTCC161210.10141504849345401No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)