Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004949920 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15896063 |
Sequences flagged as poor quality | 0 |
Sequence length | 34 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 1790 | 0.0 | 9.2292 | 5 |
TAGACAG | 2635 | 0.0 | 8.7667465 | 5 |
TAGGACC | 1740 | 0.0 | 8.609336 | 4 |
GTATAGG | 1355 | 0.0 | 8.472942 | 1 |
TACACCG | 805 | 0.0 | 8.347961 | 5 |
GTAGGAC | 1490 | 0.0 | 8.174629 | 3 |
AGTACCG | 805 | 0.0 | 8.174046 | 5 |
TACACTG | 2705 | 0.0 | 8.074069 | 5 |
CTAGTAC | 960 | 0.0 | 8.020965 | 3 |
TCTATAC | 1260 | 0.0 | 8.000131 | 3 |
GTGTAGG | 2680 | 0.0 | 7.9931197 | 1 |
GTCTAGG | 2175 | 0.0 | 7.9821916 | 1 |
TAATACG | 405 | 1.9463187E-10 | 7.9507465 | 4 |
GTATTAG | 1710 | 0.0 | 7.9420996 | 1 |
CCTACAC | 2340 | 0.0 | 7.8975644 | 3 |
TAGGACT | 2155 | 0.0 | 7.860917 | 4 |
CTATACT | 1730 | 0.0 | 7.849839 | 4 |
GTACTAG | 925 | 0.0 | 7.7194815 | 1 |
CTAGGAC | 2460 | 0.0 | 7.683052 | 3 |
ATAGGAC | 1305 | 0.0 | 7.6169825 | 3 |