FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949927

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949927
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4074462
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA153110.37577967348818075No Hit
CATTCAACTAGGCATG148110.3635081146909702No Hit
GTCGACCGATGCTCAA141290.34676970849157507No Hit
ACTGGGCACTTCTCGC118600.29108137466983375No Hit
GGGGGGGGGGGGGGGG117690.2888479509687414No Hit
TGTAAGCTGTTGTGAC115170.2826630853349473No Hit
GCTTTAGGAACTAGTC96340.23644839490465241No Hit
TAGTTGCGACATAGCT67530.16573967311512539No Hit
CATCAGTGATTCGCAA65980.16193548988799011No Hit
CAGGAGCCTCGTGCAC55510.13623884576663128No Hit
CAGGAGCCTTCCAATG49450.12136571650441211No Hit
TCCTTAAACAGGGAGG46270.11356100510938621No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)