FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004949936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7824213
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG234030.29910995521210887No Hit
ACTGTCCACAGGTCCC147540.18856848605731977No Hit
CTGGTGGACGCGGTTC138960.1776025269250722No Hit
GTGGTTAACGGCCTGT121510.1552999643542424No Hit
AAGACAAACAGTACGG101420.1296232605119518No Hit
GTGTACTGACAGTCCG99470.12713099707280462No Hit
GGGTGAATGGACAAAT84970.10859878175606925No Hit
TGTCCCATGGCCAGCT84300.1077424656000546No Hit
AGCTATCGACGGTTTA82790.10581255903948422No Hit
CATTCAACTCATCTTT80030.10228504771022977No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)