FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004949967

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949967
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6090313
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG188470.3094586435869552No Hit
ACTGTCCACAGGTCCC115940.19036788421219072No Hit
CTGGTGGACGCGGTTC109690.18010568586540626No Hit
GTGGTTAACGGCCTGT95470.15675713218680223No Hit
AAGACAAACAGTACGG79130.1299276408289689No Hit
GTGTACTGACAGTCCG78030.12812149391993483No Hit
GGGTGAATGGACAAAT67290.11048693228082039No Hit
TGTCCCATGGCCAGCT64130.10529836479668615No Hit
AGCTATCGACGGTTTA63400.10409974002978171No Hit

[OK]Adapter Content

Adapter graph