FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004949979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004949979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3325128
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCGATGGTTAGAA127670.38395514398242714No Hit
GTCGACCGATGCTCAA116030.3489489727914234No Hit
CATTCAACTAGGCATG108170.325310785028426No Hit
GGGGGGGGGGGGGGGG91230.27436537781402703No Hit
ACTGGGCACTTCTCGC85830.2581254014883036No Hit
TGTAAGCTGTTGTGAC85210.2562608116138687No Hit
GCTTTAGGAACTAGTC79620.23944942871372168No Hit
CATCAGTGATTCGCAA49920.150129558922243No Hit
TAGTTGCGACATAGCT49410.14859578338036913No Hit
CAGGAGCCTCGTGCAC40490.1217697484126927No Hit
CAGGAGCCTTCCAATG38560.11596546057775822No Hit
TCCTTAAACAGGGAGG34760.10453732908928619No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)