Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004950024 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17202468 |
Sequences flagged as poor quality | 0 |
Sequence length | 34 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTATTAG | 1905 | 0.0 | 9.701431 | 1 |
CTAGGAC | 2715 | 0.0 | 9.281521 | 3 |
TATACTG | 1680 | 0.0 | 9.000048 | 5 |
CGTATAC | 385 | 7.2759576E-12 | 8.727039 | 3 |
CCTACAC | 2460 | 0.0 | 8.536358 | 3 |
GTACTAG | 1100 | 0.0 | 8.527839 | 1 |
TAGGACC | 2050 | 0.0 | 8.331655 | 4 |
TACACTG | 2935 | 0.0 | 8.252173 | 5 |
CTTACAC | 2245 | 0.0 | 8.169047 | 3 |
ATACCGT | 535 | 0.0 | 8.112216 | 6 |
AGGACCG | 1875 | 0.0 | 8.064043 | 5 |
GTCTAGA | 1885 | 0.0 | 8.021752 | 1 |
CTAATAC | 1800 | 0.0 | 7.933121 | 3 |
TATACAG | 2295 | 0.0 | 7.930325 | 5 |
CTATACG | 340 | 3.4158802E-8 | 7.82348 | 4 |
GTATAGG | 1375 | 0.0 | 7.738695 | 1 |
TGGACCG | 1165 | 0.0 | 7.691028 | 5 |
CTAGTAC | 1025 | 0.0 | 7.6485767 | 3 |
TAGAACT | 2380 | 0.0 | 7.5881867 | 4 |
TAGGACA | 2160 | 0.0 | 7.5832853 | 4 |