FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004950026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5358698
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG176470.32931506869765753No Hit
ACTGTCCACAGGTCCC98720.18422385437656685No Hit
CTGGTGGACGCGGTTC95050.17737517583562276No Hit
GTGGTTAACGGCCTGT80700.15059628290304847No Hit
AAGACAAACAGTACGG68820.12842671857977442No Hit
GTGTACTGACAGTCCG66140.1234255037324365No Hit
GGGTGAATGGACAAAT57550.10739549047175266No Hit
AGCTATCGACGGTTTA55830.10418575556972981No Hit
TGTCCCATGGCCAGCT54730.10213301813238962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)