FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004950061

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950061
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14247763
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT426380.2992610138166953No Hit
AACTTACCTGAATCTC404210.28370067637986396No Hit
GGGGGGGGGGGGGGGG377790.2651574145358819No Hit
GCTGGACACGCCCTGA176470.1238580400305648No Hit
ATTACCTACCGAGGAT159030.11161752199275073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)