FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004950068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5214644
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG159860.30655975748296527No Hit
ACTGTCCACAGGTCCC99650.19109645835842293No Hit
CTGGTGGACGCGGTTC92290.17698235967786105No Hit
GTGGTTAACGGCCTGT79920.153260701976971No Hit
AAGACAAACAGTACGG68600.13155260454980244No Hit
GTGTACTGACAGTCCG67040.1285610292859877No Hit
GGGTGAATGGACAAAT56790.10890484566156386No Hit
TGTCCCATGGCCAGCT54900.10528043716886522No Hit
AGCTATCGACGGTTTA54790.10506949275923726No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)