FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004950134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6350309
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG178290.28075799146151786No Hit
ACTGTCCACAGGTCCC114720.1806526265099856No Hit
CTGGTGGACGCGGTTC111140.17501510556415445No Hit
GTGGTTAACGGCCTGT96310.15166191125502712No Hit
GTGTACTGACAGTCCG79180.12468684594718146No Hit
AAGACAAACAGTACGG78950.12432465884730963No Hit
GGGTGAATGGACAAAT66130.1041366648457579No Hit
AGCTATCGACGGTTTA65550.1032233234634724No Hit
TGTCCCATGGCCAGCT65120.1025461910593642No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)