Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004950220 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16203524 |
Sequences flagged as poor quality | 0 |
Sequence length | 34 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATACTG | 1905 | 0.0 | 8.892849 | 5 |
TCTATAC | 1270 | 0.0 | 8.708844 | 3 |
TACACTG | 2725 | 0.0 | 8.528883 | 5 |
TAGACAG | 2585 | 0.0 | 8.3408575 | 5 |
GTCCTAC | 1405 | 0.0 | 8.174776 | 1 |
TAGACTG | 1935 | 0.0 | 8.103779 | 5 |
GTACTAG | 1080 | 0.0 | 7.651852 | 1 |
GTCCTAG | 2165 | 0.0 | 7.63418 | 1 |
CCTACAC | 2370 | 0.0 | 7.620413 | 3 |
GTGTAGG | 2635 | 0.0 | 7.6014023 | 1 |
CTAGGAC | 2470 | 0.0 | 7.538619 | 3 |
GTATAGA | 1395 | 0.0 | 7.530527 | 1 |
GTGTATA | 2795 | 0.0 | 7.466942 | 1 |
CTATACT | 1560 | 0.0 | 7.4490123 | 4 |
TAGTACC | 1095 | 0.0 | 7.4158177 | 4 |
TAGGACT | 2360 | 0.0 | 7.415547 | 4 |
GTGTTAG | 2430 | 0.0 | 7.378057 | 1 |
TTATACG | 380 | 3.0926458E-8 | 7.3687124 | 4 |
GTCTTAG | 1865 | 0.0 | 7.360131 | 1 |
TAATACT | 1960 | 0.0 | 7.3574333 | 4 |