FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004950221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16203524
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCGACTTTCCATT484890.29924971876488105No Hit
GGGGGGGGGGGGGGGG433060.26726284973565007No Hit
ATTACCTACCGAGGAT184300.11374068998817788No Hit
GCTGGACACGCCCTGA179780.11095117333735552No Hit
CATAGTCGACTACTCC163510.10091014769379797No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)