FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004950293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7285364
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGTTACA718196198.58067489833041No Hit
ACGTTAAA153880.21121799816728443No Hit
ACATTACA128140.17588688773821048No Hit
ACGATACA115460.15848212937610257No Hit
ACGTAACA94610.12986310635954498No Hit
ACCTTACA80090.10993273637391351No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)