FastQCFastQC Report
Fri 9 Sep 2022
EGAF00004950299

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004950299
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7285364
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG189700.26038506792522653No Hit
CCTAGCACTACAGGCA156750.21515740325397606No Hit
CGTTCTCGAATAACCC86350.1185253063539447No Hit
CATTCCTCTACGCGAA83700.11488787657006569No Hit
TCGATGATGTCCCGTT81870.11237599109666999No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)