Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004950329 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2737777 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 37 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TGTAGATC | 2688869 | 98.21358715483402 | Illumina Single End PCR Primer 1 (100% over 8bp) |
TGTAGATA | 11421 | 0.4171632678629414 | No Hit |
TGTAGCTC | 7525 | 0.27485803263012293 | No Hit |
TGTAGAAC | 3887 | 0.1419765013731944 | Illumina DpnII expression Adapter 1 (100% over 8bp) |
AGTAGATC | 3700 | 0.13514614228989433 | No Hit |
TGAAGATC | 3444 | 0.12579549028280973 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)