FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004952056

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952056
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105272128
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4439250.42169281502507483No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT2332080.22152872220840827No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC2316070.22000790180663968No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG2081620.19773704963957792No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG2058580.1955484361444655No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC1928940.18323368555825148No Hit
CTAAATACTACCGTATGGCCCACCATAATCACCCCCATACTCCTTACACT1870940.17772415505840253No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1790470.170080156449388No Hit
CCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTA1373670.1304875303746116No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC1239080.11770256985780699No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG1174030.11152334642651092No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT1134090.10772936973402875No Hit
CTACCGTATGGCCCACCATAATCACCCCCATACTCCTTACACTATTCCTC1132930.10761917912403177No Hit
TGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATT1085450.10310896346656924No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)