FastQCFastQC Report
Thu 9 Feb 2023
EGAF00004952114

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952114
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84624972
Sequences flagged as poor quality0
Sequence length35-151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3464730.40942170119713606No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN3106050.3670370490639572No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA1986160.23470140705039172No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)