FastQCFastQC Report
Fri 27 May 2022
EGAF00004952119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88738961
Sequences flagged as poor quality0
Sequence length126-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2609760.2940940451173414No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1638330.18462352742669594No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1456630.1641477411483328No Hit
GACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAA1016480.11454720548283183No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAAC976280.1100170645450762No Hit
AATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGG900810.10151234472984194No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)