FastQCFastQC Report
Fri 6 Jan 2023
EGAF00004952133

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952133
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122703171
Sequences flagged as poor quality0
Sequence length35-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7287820.593939010753031No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGAGCC2488670.20282034928013393No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGAG2099940.17113983142293854No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1949860.15890868867602453No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC1629910.13283356792792259No Hit
CCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTA1532240.12487370843904272No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1526400.12439776311893357No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT1433720.11684457608679079No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1232090.10041223792007788No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)