FastQCFastQC Report
Fri 27 May 2022
EGAF00004952609

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952609
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136543701
Sequences flagged as poor quality0
Sequence length35-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGATCTCGAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTAC2217070.16237072700995558No Hit
ACAGATCTCGCAAGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTT1602980.11739684718228048No Hit
ACAGATCTCGGGACAGAGACGCTGGCTAGGCCGCCCTCCCCACTGTTACC1560890.11431431758247128No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)