FastQCFastQC Report
Thu 16 Jun 2022
EGAF00004952685

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952685
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118854274
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1613160.13572587217183288No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1446760.12172553424540712No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1446310.12168767275462052No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1407110.11838951622387597No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1212220.10199212524742694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)