FastQCFastQC Report
Tue 5 Jul 2022
EGAF00004952695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004952695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109160371
Sequences flagged as poor quality0
Sequence length127-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG3081420.2822837602851313No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA2028970.18587056652638162No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC1944210.17810584392389067No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCGCTCATTCATCGACCT1902630.17429676929185228No Hit
CTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGG1851080.16957435954482053No Hit
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC1832140.1678392976513427No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1770320.162176070288365No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT1675240.1534659496531026No Hit
CTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCTTTCATGA1506800.13803544145155022No Hit
CCAAAATGAACGAAAATCTGTTCGCTTCATTCATTGCCCCCACAATCCTA1447720.13262322093060677No Hit
AGTAGGTCTACAAGACGCTACTTCCCCTATCATAGAAGAGCTTATCACCT1433600.13132971121910167No Hit
GTGTGAGGCCGGTAGCGGCCCCCGGCGCGCCGGGCCCGGGTCTTCCCGGA1286640.1178669500857596No Hit
CGACCGTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACC1193520.10933638179005456No Hit
CTAGCATTTACCATCTCACTTCTAGGAATACTAGTATATCGCTCACACCT1189310.10895071069335226No Hit
CCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCACAGCAGTC1182570.10833327050528253No Hit
ATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTATTCGGCG1128950.10342123150167747No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)