FastQCFastQC Report
Thu 12 May 2022
EGAF00004953194

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004953194
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42004773
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT473290.11267529049615387No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA462690.11015176775267896No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)