FastQCFastQC Report
Sat 11 May 2024
EGAF00004953474

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004953474
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79380266
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length20
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCTGTCTCTTATACACAT1521150.19162823163127218No Hit
GGGACAAGCTCAATAACTTA1225780.15441873172861376No Hit
TAGCGCTGTCTCTTATACAC996800.12557277144926673No Hit
TAGCTCTGTCTCTTATACAC891630.11232388664457235No Hit

[OK]Adapter Content

Adapter graph