FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004953528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004953528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50480102
Sequences flagged as poor quality0
Sequence length21
%GC53

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGG1229460.2435533906013106No Hit
GCAGCGTAAACCGGGGGGGGT670070.13273943067706162No Hit
AGGCTCCGGGCCGGGGGGGGT623670.12354769013739315No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)