FastQCFastQC Report
Wed 8 May 2024
EGAF00004953594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004953594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45394366
Total Bases953.2 Mbp
Sequences flagged as poor quality0
Sequence length21
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGG1105460.24352361259985436No Hit
GCAGCGTAAACCGGGGGGGGT537380.11838032940034893No Hit

[OK]Adapter Content

Adapter graph