FastQCFastQC Report
Wed 8 Feb 2023
EGAF00004953930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004953930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101409414
Sequences flagged as poor quality0
Sequence length100
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12403341.2230955205006904No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)