FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004954713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004954713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2805196
Sequences flagged as poor quality0
Sequence length30
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG556711.9845672102769287No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTG101800.3628979935804842No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTT88600.3158424580671012No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGT38190.1361402197921286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)