FastQCFastQC Report
Fri 2 Sep 2022
EGAF00004954829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004954829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences612203
Sequences flagged as poor quality0
Sequence length36
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG302944.948358632675763No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT139352.2762057683480807No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT36830.6015978360119111No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGT18130.2961435994269874No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG14960.24436338926793888No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGTT10020.16367120056582538No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGT8620.14080296894984182No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGT6910.11287105747603329No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)