FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004954853

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004954853
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4151780
Sequences flagged as poor quality0
Sequence length30
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGT3091737.4467577761827455Illumina Multiplexing PCR Primer 2.01 (100% over 30bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG74740.18001917249950622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)