FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004954984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004954984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1298656
Sequences flagged as poor quality0
Sequence length46
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG139811.076574550920336No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAAAA20810.16024258926151344No Hit
GGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAAGAA20480.1577015006283419No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAAAAAAAAAAAAAGAA13880.10687972796491142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)