FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004955048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3370843
Sequences flagged as poor quality0
Sequence length36
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1300643.8585006777236432No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT231260.686059837257327No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT160590.4764090169729056No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG155610.4616352645317507No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT116660.34608553409340037No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG86420.25637503734229095No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT64730.1920291155654535No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG41660.1235892623892599No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTG37390.11092180798690417No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTT34320.10181429393181468No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)