FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2963316
Sequences flagged as poor quality0
Sequence length36
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG543641.8345664114120803No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT79270.26750437685349787No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT55830.188403801687029No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG44690.15081078089545633No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT37340.12600748620801833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)