FastQCFastQC Report
Mon 5 Sep 2022
EGAF00004955242

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955242
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3621005
Sequences flagged as poor quality0
Sequence length36
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1376493.801403201597347No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT133850.3696487577343859No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT93820.2590993384433327No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG91330.25222279450042184No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT65780.18166227331914758No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG53450.14761095331268528No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT39040.10781537169929344No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)