FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004955244

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955244
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4392705
Sequences flagged as poor quality0
Sequence length36
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1191112.711563831397738No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT162720.37043234180305756No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT121470.2765266504352102No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG111140.2530103888150923No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT92820.21130487933972347No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG66150.15059058142989343No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT52680.11992610475777454No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)