FastQCFastQC Report
Sat 10 Sep 2022
EGAF00004955291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4600928
Sequences flagged as poor quality0
Sequence length30
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGAAAAAGGGGGGGGGGGGGAAAAA398680.8665208410129435No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG336690.7317871525048859No Hit
GGGGGGGAAAAAAGGGGGGGGGGGGAAAAA95400.2073494738452764No Hit
GGTGGGGAAAAAGGGGGGGGGGGGGAAAAA67250.14616616473893962No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)