FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004955318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9570299
Sequences flagged as poor quality0
Sequence length32
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG96078010.039184773641868No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAT2137432.233399395358494No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGG1258861.3153821003920567No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGG436340.4559314186526461No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGT397560.41541021863580224No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAT375390.3922447982032745No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT357280.3733216694692611No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAAAGG185130.1934422320556547No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAA152990.1598591642748048No Hit
GGGGGGGGGAGGGGGGGGGGGGGGGAAAAAGG145480.1520119695319864No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAATT130290.1361399471427173No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGG125930.13158418561426347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)