FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3308153
Sequences flagged as poor quality0
Sequence length36
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1101293.3290177328557657No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT110740.33474872534613725No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG75260.22749854677217166No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG60620.18324424535382736No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG58840.17786359941635105No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT42490.1284402504962739No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG34850.10534579265227455No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT34530.10437848551744734No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)