FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2852084
Sequences flagged as poor quality0
Sequence length36
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG922363.2339860957811903No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT166560.5839940198114782No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT115530.40507222087427996No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG97240.34094367487072613No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT77210.2707143267870091No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT52960.1856887805548504No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG50150.17583633581619618No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAT29060.10189040715490848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)