FastQCFastQC Report
Tue 13 Sep 2022
EGAF00004955389

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955389
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13937837
Sequences flagged as poor quality0
Sequence length32
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG7704825.527988309807325No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAT1277440.9165267178831263No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGG825710.5924233437369084No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGG250580.17978399374307505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGAAAAT230220.16517627519965974No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGT226000.16214854571767484No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT205680.14756952603190868No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)