FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004955414

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955414
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5965636
Sequences flagged as poor quality0
Sequence length36
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2759804.626162239868473No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG103770.17394624814521034No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG82950.13904636488045868No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT60320.10111243796973197No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)