FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004955440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6240488
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1956533.1352195533426235No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT269730.4322258131094876No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT204760.3281153653368134No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG185070.29656334568706805No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT156130.25018876728871203No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG102390.16407370705624305No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT81650.13083912668368242No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)