FastQCFastQC Report
Sun 11 Sep 2022
EGAF00004955447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4787332
Sequences flagged as poor quality0
Sequence length36
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1825613.813418413429442No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT176030.36769958716044765No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT132460.2766885605594097No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG123370.2577009490881351No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT101630.21228943386420665No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG69490.14515391871714767No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT56360.11772736881419546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)