FastQCFastQC Report
Sun 4 Sep 2022
EGAF00004955473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2943080
Sequences flagged as poor quality0
Sequence length36
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1032793.509214836158039No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT159690.5425948326243255No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT126430.429583973252511No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG115440.3922421408864183No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTT99570.3383190399173655No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG63940.2172553923100969No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGT52030.17678758307623305No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTT32310.10978294847574649No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG29670.1008127539856205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)