FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004955540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9428633
Sequences flagged as poor quality0
Sequence length36
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1282211.359910816339972No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT359800.3816035686191201No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT103230.1094856486619004No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)