FastQCFastQC Report
Sat 3 Sep 2022
EGAF00004955560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1802013
Sequences flagged as poor quality0
Sequence length30
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGAAAAAGGGGGGGGGGGGGAAAAA275031.5262376020594746No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGG214281.1891146179300593No Hit
GGGGGGGAAAAAAGGGGGGGGGGGGAAAAA62500.3468343458121556No Hit
GGTGGGGAAAAAGGGGGGGGGGGGGAAAAA44770.2484443785921633No Hit
GGGGGGGAAAAAGGGGGGTGGGGGGAAAAA29220.162151993354099No Hit
GGGGGGGAAAGAGGGGGGGGGGGGGAAAAA26580.14750171058699355No Hit
GGGGGGGAGAAAGGGGGGGGGGGGGAAAAA24710.13712442696029384No Hit
GGGGGGGAAAAAGGAGGGGGGGGGGAAAAA22180.1230845726418178No Hit
GGGGGGGAAAAAAGAGGGGGGGGGGAAAAA18840.1045497452016162No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)