FastQCFastQC Report
Mon 12 Sep 2022
EGAF00004955568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004955568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10077052
Sequences flagged as poor quality0
Sequence length36
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6529056.479127030405321No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG824980.8186719687464152No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG705110.6997185287919523No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG643500.6385796163401757No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTG238930.2371030733988472No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG232520.23074208607834912No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGG231810.23003751493988522No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT197230.19572192343554445No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTG173440.1721138285284228No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG134820.1337891280108508No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA119420.11850688078219702No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTG110940.11009172126927598No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)